| _initialize(ParameterHandler ¶m) | FuelCell::Application::AppLaplace< dim > | |
| add_vector_for_cell_matrix(std::string name, unsigned int block, unsigned int components, bool values, bool derivatives) | AppFrame::BlockMatrixApplication< dim > | |
| add_vector_for_flux_matrix(std::string name, unsigned int block, unsigned int components, bool values, bool derivatives) | AppFrame::BlockMatrixApplication< dim > | |
| add_vector_for_transfer(FEVector *) | AppFrame::DoFApplication< dim > | |
| AppLaplace(boost::shared_ptr< AppFrame::ApplicationData > data=boost::shared_ptr< AppFrame::ApplicationData >()) | FuelCell::Application::AppLaplace< dim > | |
| ApplicationBase(boost::shared_ptr< ApplicationData > ex_data=boost::shared_ptr< ApplicationData >()) | AppFrame::ApplicationBase | inline |
| ApplicationBase(const ApplicationBase &other) | AppFrame::ApplicationBase | inline |
| assemble(const FEVectors &) | AppFrame::BlockMatrixApplication< dim > | |
| assemble_numerically(const FEVectors &src, const double delta=1e-6) | AppFrame::BlockMatrixApplication< dim > | |
| bdry_estimate(const FaceInfo &) | AppFrame::DoFApplication< dim > | virtual |
| bdry_matrix(MatrixVector &face_matrices, const typename DoFApplication< dim >::FaceInfo &face) | AppFrame::BlockMatrixApplication< dim > | virtual |
| bdry_residual(FEVector &face_vector, const FaceInfo &face) | AppFrame::DoFApplication< dim > | virtual |
| block_info | AppFrame::DoFApplication< dim > | protected |
| BlockMatrixApplication(boost::shared_ptr< ApplicationData > data=boost::shared_ptr< ApplicationData >()) | AppFrame::BlockMatrixApplication< dim > | |
| BlockMatrixApplication(DoFApplication< dim > &, bool triangulation_only) | AppFrame::BlockMatrixApplication< dim > | |
| boundary_constraints | AppFrame::DoFApplication< dim > | protected |
| boundary_fluxes | AppFrame::DoFApplication< dim > | protected |
| cell_couplings | AppFrame::BlockMatrixApplication< dim > | protected |
| cell_dresidual_dlambda(std::vector< AppFrame::FEVector > &cell_vector, const typename DoFApplication< dim >::CellInfo &cell, std::vector< std::vector< double > > &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| cell_dresponses_dl(std::vector< std::vector< double > > &cell_df_dl, const typename DoFApplication< dim >::CellInfo &info, const AppFrame::FEVector &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| cell_dresponses_du(std::vector< AppFrame::FEVector > &df_du, const typename DoFApplication< dim >::CellInfo &info, std::vector< std::vector< double > > &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| CELL_Dvalues typedef | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| cell_errors | AppFrame::DoFApplication< dim > | protected |
| cell_estimate(const CellInfo &) | AppFrame::DoFApplication< dim > | virtual |
| cell_matrix(MatrixVector &cell_matrices, const typename DoFApplication< dim >::CellInfo &cell) | FuelCell::Application::AppLaplace< dim > | virtual |
| cell_residual(AppFrame::FEVector &cell_vector, const typename DoFApplication< dim >::CellInfo &cell) | FuelCell::Application::AppLaplace< dim > | virtual |
| AppFrame::OptimizationBlockMatrixApplication::cell_residual(FEVector &cell_vector, const CellInfo &cell) | AppFrame::DoFApplication< dim > | virtual |
| cell_responses(std::vector< double > &resp, const typename DoFApplication< dim >::CellInfo &info, const AppFrame::FEVector &sol) | FuelCell::Application::AppLaplace< dim > | inlinevirtual |
| CellInfo typedef | AppFrame::DoFApplication< dim > | |
| CGDL | FuelCell::Application::AppLaplace< dim > | private |
| check_responses() | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| clear() | AppFrame::ApplicationBase | inlinevirtual |
| clear_events() | AppFrame::ApplicationBase | inline |
| coarsening_threshold | AppFrame::DoFApplication< dim > | protected |
| constrain_boundary(FEVector &v, bool homogeneous) const | AppFrame::DoFApplication< dim > | protected |
| d_out | AppFrame::DoFApplication< dim > | protected |
| data | AppFrame::ApplicationBase | protected |
| data_interpretation | AppFrame::DoFApplication< dim > | protected |
| data_out(const std::string &basename, const FEVectors &src) | AppFrame::DoFApplication< dim > | virtual |
| data_out(const std::string &basename, const FEVectors &src, const std::vector< std::string > &solution_names) | AppFrame::DoFApplication< dim > | virtual |
| data_out(const std::string &basename, const FEVector &solution, const std::vector< std::string > &solution_names, const FEVector &postprocessing=FEVector(), const std::vector< std::string > &postprocessing_names=std::vector< std::string >()) | AppFrame::DoFApplication< dim > | virtual |
| AppFrame::ApplicationBase::data_out(const std::string &filename, const FEVectors &src, const std::vector< std::string >) | AppFrame::ApplicationBase | inlinevirtual |
| declare_parameters(ParameterHandler ¶m) | FuelCell::Application::AppLaplace< dim > | virtual |
| delete_vector_for_transfer() | AppFrame::DoFApplication< dim > | |
| dfunction(std::vector< AppFrame::FEVector > &dst, const AppFrame::FEVectors &src, bool dfunctional_du, bool dresidual_dlambda) | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| dirichlet_bc(std::map< unsigned int, double > &boundary_values) const | FuelCell::Application::AppLaplace< dim > | virtual |
| do_assemble(const FEVectors &, typename DoFHandler< dim >::active_cell_iterator begin, typename DoFHandler< dim >::active_cell_iterator end, Threads::Mutex &mutex) | AppFrame::BlockMatrixApplication< dim > | |
| dof | AppFrame::DoFApplication< dim > | protected |
| DoFApplication(boost::shared_ptr< ApplicationData > data=boost::shared_ptr< ApplicationData >(), bool multigrid=false) | AppFrame::DoFApplication< dim > | |
| DoFApplication(bool multigrid) | AppFrame::DoFApplication< dim > | |
| DoFApplication(DoFApplication< dim > &, bool triangulation_only, bool multigrid=false) | AppFrame::DoFApplication< dim > | |
| dresidual_dlambda(std::vector< AppFrame::FEVector > &dst, const AppFrame::FEVectors &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| dresponses_dl(std::vector< std::vector< double > > &df_dl, const AppFrame::FEVectors &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| dresponses_du(std::vector< AppFrame::FEVector > &dst, const AppFrame::FEVectors &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| element | AppFrame::DoFApplication< dim > | protected |
| estimate(const AppFrame::FEVectors &sol) | FuelCell::Application::AppLaplace< dim > | virtual |
| evaluate(const AppFrame::FEVectors &src) | FuelCell::Application::AppLaplace< dim > | virtual |
| face_errors | AppFrame::DoFApplication< dim > | protected |
| face_estimate(const FaceInfo &, const FaceInfo &) | AppFrame::DoFApplication< dim > | virtual |
| face_matrix(MatrixVector &matrices11, MatrixVector &matrices12, MatrixVector &matrices21, MatrixVector &matrices22, const typename DoFApplication< dim >::FaceInfo &face1, const typename DoFApplication< dim >::FaceInfo &face2) | AppFrame::BlockMatrixApplication< dim > | virtual |
| face_residual(FEVector &face_vector1, FEVector &face_vector2, const FaceInfo &face1, const FaceInfo &face2) | AppFrame::DoFApplication< dim > | virtual |
| FaceInfo typedef | AppFrame::DoFApplication< dim > | |
| FicksLaw | FuelCell::Application::AppLaplace< dim > | private |
| fill_local_data(const INFO &info, const std::vector< VectorSelector > &data_vector, std::vector< std::vector< std::vector< TYPE > > > &data) const | AppFrame::DoFApplication< dim > | |
| filtered_matrix | AppFrame::BlockMatrixApplication< dim > | protected |
| flux_couplings | AppFrame::BlockMatrixApplication< dim > | protected |
| g_out | AppFrame::DoFApplication< dim > | protected |
| get_bool_transfer_solution() | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
| get_data() | AppFrame::ApplicationBase | inline |
| get_data() const | AppFrame::ApplicationBase | inline |
| get_n_dvar() const | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| get_n_resp() const | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| get_name_dvar() const | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
| get_name_responses() const | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
| global_dresponses_dl(std::vector< std::vector< double > > &df_dl, const AppFrame::FEVector &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| global_dresponses_du(std::vector< AppFrame::FEVector > &df_du, const AppFrame::FEVector &src) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| global_responses(std::vector< double > &resp, const AppFrame::FEVector &sol) | FuelCell::Application::AppLaplace< dim > | inlinevirtual |
| grid | FuelCell::Application::AppLaplace< dim > | private |
| grid_out(const std::string &basename) | AppFrame::DoFApplication< dim > | virtual |
| AppFrame::ApplicationBase::grid_out(const std::string &filename) const | AppFrame::ApplicationBase | inlinevirtual |
| hanging_node_constraints | AppFrame::DoFApplication< dim > | protected |
| id() const | AppFrame::ApplicationBase | inlinevirtual |
| init_solution(AppFrame::FEVector &src) | FuelCell::Application::AppLaplace< dim > | virtual |
| init_vector(FEVector &dst) const | AppFrame::DoFApplication< dim > | virtual |
| initial_refinement | AppFrame::DoFApplication< dim > | protected |
| initialize(ParameterHandler ¶m) | FuelCell::Application::AppLaplace< dim > | virtual |
| integrate_1form(BOX &box, WORKER &local_forms, FEVector &dst, const FEVectors &src) | AppFrame::DoFApplication< dim > | |
| integrate_functional(LocalEstimate< dim > &local_forms, FEVectors &dst, const FEVectors &src) | AppFrame::DoFApplication< dim > | |
| interior_fluxes | AppFrame::DoFApplication< dim > | protected |
| mapping | AppFrame::DoFApplication< dim > | protected |
| mapping_degree | AppFrame::DoFApplication< dim > | protected |
| matrix | AppFrame::BlockMatrixApplication< dim > | protected |
| memory_consumption() const | AppFrame::DoFApplication< dim > | |
| mg_dof | AppFrame::DoFApplication< dim > | protected |
| n_dvar | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| n_obj | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| n_resp | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| name_design_var | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| name_output_var | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| name_responses | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| nitrogen | FuelCell::Application::AppLaplace< dim > | private |
| notifications | AppFrame::ApplicationBase | protected |
| notify(const Event &reason) | AppFrame::ApplicationBase | inlinevirtual |
| OC | FuelCell::Application::AppLaplace< dim > | private |
| optimization | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| OptimizationBlockMatrixApplication(boost::shared_ptr< AppFrame::ApplicationData > data=boost::shared_ptr< AppFrame::ApplicationData >()) | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| OptimizationBlockMatrixApplication(AppFrame::DoFApplication< dim > &, bool triangulation_only) | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| output_coarse_solution | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| output_levels | AppFrame::DoFApplication< dim > | |
| output_materials | AppFrame::DoFApplication< dim > | |
| output_materials_and_levels | AppFrame::DoFApplication< dim > | |
| oxygen | FuelCell::Application::AppLaplace< dim > | private |
| post_cell_assemble() | AppFrame::BlockMatrixApplication< dim > | virtual |
| postprocessing_interpretations | AppFrame::DoFApplication< dim > | |
| print_caller_name(const std::string &caller_name) const | AppFrame::ApplicationBase | inlineprotected |
| print_default_parameter_file() | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
| print_dresponses_dl(std::vector< std::vector< double > > pdf_pdl) | AppFrame::OptimizationBlockMatrixApplication< dim > | inlineprotected |
| print_dresponses_du(std::vector< AppFrame::FEVector > df_du) | AppFrame::OptimizationBlockMatrixApplication< dim > | inlineprotected |
| print_parameters_to_file(ParameterHandler ¶m, const std::string &file_name, const ParameterHandler::OutputStyle &style) | AppFrame::ApplicationBase | inline |
| print_responses(std::vector< double > &resp) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| quadrature_assemble_cell | AppFrame::BlockMatrixApplication< dim > | protected |
| quadrature_assemble_face | AppFrame::BlockMatrixApplication< dim > | protected |
| quadrature_residual_bdry | AppFrame::DoFApplication< dim > | protected |
| quadrature_residual_cell | AppFrame::DoFApplication< dim > | protected |
| quadrature_residual_face | AppFrame::DoFApplication< dim > | protected |
| read_in_initial_solution | AppFrame::OptimizationBlockMatrixApplication< dim > | protected |
| read_init_solution(AppFrame::FEVector &dst, bool &good_solution) const | AppFrame::DoFApplication< dim > | |
| refinement | AppFrame::DoFApplication< dim > | protected |
| refinement_threshold | AppFrame::DoFApplication< dim > | protected |
| remesh() | AppFrame::BlockMatrixApplication< dim > | virtual |
| remesh_dofs() | AppFrame::DoFApplication< dim > | virtual |
| remesh_matrices() | AppFrame::BlockMatrixApplication< dim > | |
| residual(FEVector &dst, const FEVectors &src, bool apply_boundaries=true) | AppFrame::DoFApplication< dim > | virtual |
| residual_constraints(FEVector &dst) const | AppFrame::BlockMatrixApplication< dim > | virtual |
| responses(std::vector< double > &f, const AppFrame::FEVectors &vectors) | AppFrame::OptimizationBlockMatrixApplication< dim > | virtual |
| sensitivity_analysis | AppFrame::OptimizationBlockMatrixApplication< dim > | static |
| set_optimization_parameters(unsigned int &n_dvar, unsigned int &n_resp, std::vector< std::string > &name_design_var, std::vector< std::string > &name_responses) | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| set_output_variables(std::vector< std::string > &dakota_name_responses) | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
| set_parameters(const std::vector< std::string > &name_dvar, const std::vector< double > &value_dvar, ParameterHandler ¶m) | FuelCell::Application::AppLaplace< dim > | virtual |
| set_read_initial_solution(bool &read) | AppFrame::OptimizationBlockMatrixApplication< dim > | inlinevirtual |
| solution_interpretations | AppFrame::DoFApplication< dim > | |
| solve(AppFrame::FEVector &start, const AppFrame::FEVectors &rhs) | FuelCell::Application::AppLaplace< dim > | virtual |
| solve_adjoint(std::vector< std::vector< double > > &df_dl, const AppFrame::FEVector &sol) | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| solve_direct(std::vector< std::vector< double > > &df_dl, const AppFrame::FEVectors &sol) | AppFrame::OptimizationBlockMatrixApplication< dim > | |
| sort_cuthill | AppFrame::DoFApplication< dim > | protected |
| sort_direction | AppFrame::DoFApplication< dim > | protected |
| start_vector(FEVector &dst, std::string caller) const | AppFrame::ApplicationBase | inlinevirtual |
| store_triangulation(Triangulation< dim > &new_tr) | AppFrame::DoFApplication< dim > | inline |
| system_management | FuelCell::Application::AppLaplace< dim > | private |
| tr | AppFrame::DoFApplication< dim > | protected |
| transfer_solution_to_coarse_mesh(Triangulation< dim > &tr_coarse, AppFrame::FEVector &coarse_solution, AppFrame::FEVector &refined_solution) | AppFrame::DoFApplication< dim > | |
| transfer_vectors | AppFrame::DoFApplication< dim > | protected |
| Tsolve(FEVector &start, const FEVectors &rhs) | AppFrame::ApplicationBase | inlinevirtual |
| verbosity | AppFrame::DoFApplication< dim > | |
| ~AppLaplace() | FuelCell::Application::AppLaplace< dim > | |
| ~ApplicationBase() | AppFrame::ApplicationBase | inlinevirtual |
| ~DoFApplication() | AppFrame::DoFApplication< dim > | |
| ~OptimizationBlockMatrixApplication() | AppFrame::OptimizationBlockMatrixApplication< dim > | inline |
1.8.2